ByteScout Document Parser SDK - C# - Blood Test Results to JSON - ByteScout

ByteScout Document Parser SDK – C# – Blood Test Results to JSON

  • Home
  • /
  • Articles
  • /
  • ByteScout Document Parser SDK – C# – Blood Test Results to JSON

blood test results to JSON in C# with ByteScout Document Parser SDK

ByteScout Document Parser SDK is the robost offline data extraction platform for template based data extraction and processing. Supports high load with millions of documents as input. Templates can be quickly created and updated with no special technical knowledge required.

On-demand (REST Web API) version:
 Web API (on-demand version)

On-premise offline SDK for Windows:
 60 Day Free Trial (on-premise)

BloodTestResultsToJson.csproj
      
<?xml version="1.0" encoding="utf-8"?> <Project ToolsVersion="15.0" xmlns="http://schemas.microsoft.com/developer/msbuild/2003"> <Import Project="$(MSBuildExtensionsPath)\$(MSBuildToolsVersion)\Microsoft.Common.props" Condition="Exists('$(MSBuildExtensionsPath)\$(MSBuildToolsVersion)\Microsoft.Common.props')" /> <PropertyGroup> <Configuration Condition=" '$(Configuration)' == '' ">Debug</Configuration> <Platform Condition=" '$(Platform)' == '' ">AnyCPU</Platform> <ProjectGuid>{A73776C6-D2B2-4E37-B852-06C6454D1B5B}</ProjectGuid> <OutputType>Exe</OutputType> <RootNamespace>BloodTestResultsToJson</RootNamespace> <AssemblyName>BloodTestResultsToJson</AssemblyName> <TargetFrameworkVersion>v4.0</TargetFrameworkVersion> <FileAlignment>512</FileAlignment> </PropertyGroup> <PropertyGroup Condition=" '$(Configuration)|$(Platform)' == 'Debug|AnyCPU' "> <PlatformTarget>AnyCPU</PlatformTarget> <DebugSymbols>true</DebugSymbols> <DebugType>full</DebugType> <Optimize>false</Optimize> <OutputPath>bin\Debug\</OutputPath> <DefineConstants>DEBUG;TRACE</DefineConstants> <ErrorReport>prompt</ErrorReport> <WarningLevel>4</WarningLevel> </PropertyGroup> <PropertyGroup Condition=" '$(Configuration)|$(Platform)' == 'Release|AnyCPU' "> <PlatformTarget>AnyCPU</PlatformTarget> <DebugType>pdbonly</DebugType> <Optimize>true</Optimize> <OutputPath>bin\Release\</OutputPath> <DefineConstants>TRACE</DefineConstants> <ErrorReport>prompt</ErrorReport> <WarningLevel>4</WarningLevel> </PropertyGroup> <ItemGroup> <Reference Include="ByteScout.DocumentParser, Version=1.0.0.100, Culture=neutral, PublicKeyToken=f7dd1bd9d40a50eb, processorArchitecture=MSIL"> <SpecificVersion>False</SpecificVersion> <HintPath>c:\Program Files\ByteScout Document Parser SDK\net40\ByteScout.DocumentParser.dll</HintPath> </Reference> <Reference Include="Newtonsoft.Json, Version=12.0.0.0, Culture=neutral, PublicKeyToken=30ad4fe6b2a6aeed, processorArchitecture=MSIL"> <HintPath>packages\Newtonsoft.Json.12.0.3\lib\net40\Newtonsoft.Json.dll</HintPath> </Reference> <Reference Include="System" /> <Reference Include="System.Core" /> <Reference Include="System.Xml.Linq" /> <Reference Include="System.Data" /> <Reference Include="System.Xml" /> </ItemGroup> <ItemGroup> <Compile Include="Program.cs" /> </ItemGroup> <ItemGroup> <None Include="..\..\SampleBloodReport.pdf"> <Link>SampleBloodReport.pdf</Link> <CopyToOutputDirectory>Always</CopyToOutputDirectory> </None> <None Include="..\..\_Sample Templates\SampleBloodReport.yml"> <Link>Templates\SampleBloodReport.yml</Link> <CopyToOutputDirectory>Always</CopyToOutputDirectory> </None> <None Include="packages.config" /> </ItemGroup> <Import Project="$(MSBuildToolsPath)\Microsoft.CSharp.targets" /> </Project>

ON-PREMISE OFFLINE SDK

60 Day Free Trial or Visit ByteScout Document Parser SDK Home Page

Explore ByteScout Document Parser SDK Documentation

Explore Samples

Sign Up for ByteScout Document Parser SDK Online Training

ON-DEMAND REST WEB API

Get Your API Key

Explore Web API Docs

Explore Web API Samples

BloodTestResultsToJson.sln
      
Microsoft Visual Studio Solution File, Format Version 12.00 # Visual Studio 15 VisualStudioVersion = 15.0.27703.2018 MinimumVisualStudioVersion = 10.0.40219.1 Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "BloodTestResultsToJson", "BloodTestResultsToJson.csproj", "{A73776C6-D2B2-4E37-B852-06C6454D1B5B}" EndProject Global GlobalSection(SolutionConfigurationPlatforms) = preSolution Debug|Any CPU = Debug|Any CPU Release|Any CPU = Release|Any CPU EndGlobalSection GlobalSection(ProjectConfigurationPlatforms) = postSolution {A73776C6-D2B2-4E37-B852-06C6454D1B5B}.Debug|Any CPU.ActiveCfg = Debug|Any CPU {A73776C6-D2B2-4E37-B852-06C6454D1B5B}.Debug|Any CPU.Build.0 = Debug|Any CPU {A73776C6-D2B2-4E37-B852-06C6454D1B5B}.Release|Any CPU.ActiveCfg = Release|Any CPU {A73776C6-D2B2-4E37-B852-06C6454D1B5B}.Release|Any CPU.Build.0 = Release|Any CPU EndGlobalSection GlobalSection(SolutionProperties) = preSolution HideSolutionNode = FALSE EndGlobalSection GlobalSection(ExtensibilityGlobals) = postSolution SolutionGuid = {7E6DAA79-020B-421A-844A-5FE05EFC9B15} EndGlobalSection EndGlobal

ON-PREMISE OFFLINE SDK

60 Day Free Trial or Visit ByteScout Document Parser SDK Home Page

Explore ByteScout Document Parser SDK Documentation

Explore Samples

Sign Up for ByteScout Document Parser SDK Online Training

ON-DEMAND REST WEB API

Get Your API Key

Explore Web API Docs

Explore Web API Samples

Program.cs
      
using ByteScout.DocumentParser; using Newtonsoft.Json; using Newtonsoft.Json.Linq; using System; using System.Collections.Generic; using System.IO; using System.Net; using System.Threading; namespace BloodTestResultsToJson { class Program { static void Main(string[] args) { // Sample document containing blood test report // Report consists of sample patient information such as patinet name, DOB, patientID // Report information such as report type, collection date and time // Test components such as complete blood count, Hemoglobin, White Blood Cell (WBC), Red Blood Cell (RBC), etc. string sampleDocument = @".\SampleBloodReport.pdf"; // Sample template which primarily extracts patient name, report date and test result table. string sampleTemplate = @".\Templates\SampleBloodReport.yml"; // Perform parsing with SDK ParseWithSDK(sampleDocument, sampleTemplate); // Perform parsing with PDF.co api // ParseWithPDFCoApi(sampleDocument, sampleTemplate); Console.WriteLine(); Console.WriteLine("Press any key to continue..."); Console.ReadLine(); } /// <summary> /// Parse with Document Parser SDK /// </summary> static void ParseWithSDK(string sampleDocument, string sampleTemplate) { // Create DocumentParser instance using (DocumentParser documentParser = new DocumentParser("demo", "demo")) { // Add sample template documentParser.AddTemplate(sampleTemplate); // Parse document data in JSON format string jsonString = documentParser.ParseDocument(sampleDocument, OutputFormat.JSON); string resultFile = "result.json"; // Write output file File.WriteAllText(resultFile, jsonString); Console.WriteLine({code}quot;Generated JSON file saved as {resultFile} file"); } } /// <summary> /// Parse with PDF.Co API /// </summary> static void ParseWithPDFCoApi(string SourceFile, string sampleTemplate) { // The authentication key (API Key). // Get your own by registering at https://app.pdf.co/documentation/api const String API_KEY = "***********************************"; // PDF document password. Leave empty for unprotected documents. const string Password = ""; // Destination TXT file name const string DestinationFile = @".\result.json"; // (!) Make asynchronous job const bool Async = true; // Template text. Use Document Parser SDK (https://bytescout.com/products/developer/documentparsersdk/index.html) // to create templates. // Read template from file: String templateText = File.ReadAllText(sampleTemplate); // Create standard .NET web client instance WebClient webClient = new WebClient(); // Set API Key webClient.Headers.Add("x-api-key", API_KEY); // 1. RETRIEVE THE PRESIGNED URL TO UPLOAD THE FILE. // * If you already have a direct file URL, skip to the step 3. // Prepare URL for `Get Presigned URL` API call string query = Uri.EscapeUriString(string.Format( "https://api.pdf.co/v1/file/upload/get-presigned-url?contenttype=application/octet-stream&name={0}", Path.GetFileName(SourceFile))); try { // Execute request string response = webClient.DownloadString(query); // Parse JSON response JObject json = JObject.Parse(response); if (json["error"].ToObject<bool>() == false) { // Get URL to use for the file upload string uploadUrl = json["presignedUrl"].ToString(); string uploadedFileUrl = json["url"].ToString(); // 2. UPLOAD THE FILE TO CLOUD. webClient.Headers.Add("content-type", "application/octet-stream"); webClient.UploadFile(uploadUrl, "PUT", SourceFile); // You can use UploadData() instead if your file is byte[] or Stream webClient.Headers.Remove("content-type"); // 3. PARSE UPLOADED PDF DOCUMENT // URL for `Document Parser` API call query = Uri.EscapeUriString(string.Format( "https://api.pdf.co/v1/pdf/documentparser?url={0}&async={1}", uploadedFileUrl, Async)); Dictionary<string, string> requestBody = new Dictionary<string, string>(); requestBody.Add("template", templateText); // Execute request response = webClient.UploadString(query, "POST", JsonConvert.SerializeObject(requestBody)); // Parse JSON response json = JObject.Parse(response); if (json["error"].ToObject<bool>() == false) { // Asynchronous job ID string jobId = json["jobId"].ToString(); // Get URL of generated JSON file string resultFileUrl = json["url"].ToString(); // Check the job status in a loop. // If you don't want to pause the main thread you can rework the code // to use a separate thread for the status checking and completion. do { string status = CheckJobStatus(webClient, jobId); // Possible statuses: "working", "failed", "aborted", "success". // Display timestamp and status (for demo purposes) Console.WriteLine(DateTime.Now.ToLongTimeString() + ": " + status); if (status == "success") { // Download JSON file webClient.DownloadFile(resultFileUrl, DestinationFile); Console.WriteLine("Generated JSON file saved as \"{0}\" file.", DestinationFile); break; } else if (status == "working") { // Pause for a few seconds Thread.Sleep(3000); } else { Console.WriteLine(status); break; } } while (true); } else { Console.WriteLine(json["message"].ToString()); } } else { Console.WriteLine(json["message"].ToString()); } } catch (WebException e) { Console.WriteLine(e.ToString()); } webClient.Dispose(); } /// <summary> /// Check PDF.co job status /// </summary> static string CheckJobStatus(WebClient webClient, string jobId) { string url = "https://api.pdf.co/v1/job/check?jobid=" + jobId; string response = webClient.DownloadString(url); JObject json = JObject.Parse(response); return Convert.ToString(json["status"]); } } }

ON-PREMISE OFFLINE SDK

60 Day Free Trial or Visit ByteScout Document Parser SDK Home Page

Explore ByteScout Document Parser SDK Documentation

Explore Samples

Sign Up for ByteScout Document Parser SDK Online Training

ON-DEMAND REST WEB API

Get Your API Key

Explore Web API Docs

Explore Web API Samples

packages.config
      
<?xml version="1.0" encoding="utf-8"?> <packages> <package id="Newtonsoft.Json" version="12.0.3" targetFramework="net40" /> </packages>

ON-PREMISE OFFLINE SDK

60 Day Free Trial or Visit ByteScout Document Parser SDK Home Page

Explore ByteScout Document Parser SDK Documentation

Explore Samples

Sign Up for ByteScout Document Parser SDK Online Training

ON-DEMAND REST WEB API

Get Your API Key

Explore Web API Docs

Explore Web API Samples

VIDEO

ON-PREMISE OFFLINE SDK

60 Day Free Trial or Visit ByteScout Document Parser SDK Home Page

Explore ByteScout Document Parser SDK Documentation

Explore Samples

Sign Up for ByteScout Document Parser SDK Online Training

ON-DEMAND REST WEB API

Get Your API Key

Explore Web API Docs

Explore Web API Samples

Tutorials:

prev
next